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  5. Seita.3G339400.1

Seita.3G339400.1


Description : Unknown function


Gene families : OG_42_0000093 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G339400.1
Cluster HCAA Clusters: Cluster_289

Target Alias Description ECC score Gene Family Method Actions
At3g58450 No alias Adenine nucleotide alpha hydrolases-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00040026-RA No alias (at1g09740 : 117.0) Adenine nucleotide alpha... 0.02 Orthogroups_2024-Update
PSME_00051345-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Seita.1G336200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G314400.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sopen01g028410 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen04g006740 No alias Universal stress protein family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR006016 UspA 18 161
No external refs found!