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  5. Seita.3G349100.1

Seita.3G349100.1


Description : Unknown function


Gene families : OG_42_0000140 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000140_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G349100.1
Cluster HCAA Clusters: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
Brara.J00202.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os07g34390 No alias ankyrin repeat family protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g16220 No alias expressed protein 0.04 Orthogroups_2024-Update
LOC_Os09g16240 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os11g08070 No alias ankyrin repeat family protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g09220 No alias expressed protein 0.03 Orthogroups_2024-Update
LOC_Os11g15460 No alias expressed protein 0.02 Orthogroups_2024-Update
Potri.019G105700 No alias Ankyrin repeat family protein 0.02 Orthogroups_2024-Update
Potri.019G108000 No alias Ankyrin repeat family protein 0.03 Orthogroups_2024-Update
Sobic.005G208500.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Solyc05g055960 No alias Ankyrin repeat-containing-like protein (AHRD V3.3 *-*... 0.02 Orthogroups_2024-Update
Solyc05g055970 No alias Ankyrin repeat-containing-like protein (AHRD V3.3 *-*... 0.02 Orthogroups_2024-Update
Solyc07g061750 No alias Ankyrin repeat-containing-like protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen05g034360 No alias Domain of unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR026961 PGG_dom 592 703
IPR002110 Ankyrin_rpt 191 220
IPR002110 Ankyrin_rpt 431 521
No external refs found!