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  5. Seita.3G351600.1

Seita.3G351600.1


Description : transcriptional co-regulator *(Oberon)


Gene families : OG_42_0004191 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004191_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G351600.1
Cluster HCAA Clusters: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
A4A49_37992 No alias protein oberon 2 0.02 Orthogroups_2024-Update
At3g07780 No alias Potyvirus VPg interacting protein (DUF1423)... 0.04 Orthogroups_2024-Update
Sopen07g024220 No alias Protein of unknown function (DUF1423) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR032535 Oberon_cc 444 583
IPR032881 Oberon_PHD 227 350
No external refs found!