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  5. Seita.3G359500.1

Seita.3G359500.1


Description : component *(NdhU) of NDH electron donor-binding subcomplex E


Gene families : OG_42_0008840 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008840_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G359500.1
Cluster HCAA Clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
A4A49_29919 No alias nad(p)h-quinone oxidoreductase subunit u, chloroplastic 0.04 Orthogroups_2024-Update
Bradi4g06980 No alias Chaperone DnaJ-domain superfamily protein 0.05 Orthogroups_2024-Update
Brara.J01509.1 No alias component *(NdhU) of NDH electron donor-binding subcomplex E 0.05 Orthogroups_2024-Update
Glyma.04G055400 No alias Chaperone DnaJ-domain superfamily protein 0.05 Orthogroups_2024-Update
LOC_Os12g31460 No alias heat shock protein DnaJ, putative, expressed 0.02 Orthogroups_2024-Update
Mp2g09770.1 No alias component NdhU of NDH electron donor-binding subcomplex E 0.03 Orthogroups_2024-Update
Potri.006G221900 No alias Chaperone DnaJ-domain superfamily protein 0.04 Orthogroups_2024-Update
Sobic.008G102000.1 No alias component *(NdhU) of NDH electron donor-binding subcomplex E 0.12 Orthogroups_2024-Update
Solyc06g082970 No alias Chaperone DnaJ-domain superfamily protein (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
CC GO:0009512 cytochrome b6f complex IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 103 164
No external refs found!