1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.3G370000.1

Seita.3G370000.1


Description : GARP subgroup HHO transcription factor


Gene families : OG_42_0002261 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002261_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G370000.1
Cluster HCAA Clusters: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
Brara.K01286.1 No alias GARP subgroup HHO transcription factor 0.03 Orthogroups_2024-Update
Glyma.02G135400 No alias Homeodomain-like superfamily protein 0.07 Orthogroups_2024-Update
Potri.004G144800 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Sobic.002G016300.1 No alias GARP subgroup HHO transcription factor 0.03 Orthogroups_2024-Update
Sobic.008G147101.1 No alias GARP subgroup HHO transcription factor 0.03 Orthogroups_2024-Update
Solyc01g108300 No alias Myb family transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0008285 negative regulation of cell proliferation IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0042127 regulation of cell proliferation IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 241 292
No external refs found!