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  5. Seita.3G370300.1

Seita.3G370300.1


Description : regulatory protein *(CYCD) of cell cycle


Gene families : OG_42_0000136 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G370300.1

Target Alias Description ECC score Gene Family Method Actions
At3g50070 No alias CYCD3 [Source:UniProtKB/TrEMBL;Acc:A0A178VE15] 0.03 Orthogroups_2024-Update
Bradi4g32556 No alias CYCLIN D4;1 0.04 Orthogroups_2024-Update
Brara.A02151.1 No alias regulatory protein *(CYCD) of cell cycle 0.03 Orthogroups_2024-Update
GRMZM2G047637 No alias CYCLIN D1;1 0.03 Orthogroups_2024-Update
GRMZM2G140633 No alias CYCLIN D4;1 0.03 Orthogroups_2024-Update
Glyma.03G069200 No alias CYCLIN D7;1 0.02 Orthogroups_2024-Update
Glyma.06G198800 No alias CYCLIN D7;1 0.02 Orthogroups_2024-Update
Glyma.11G048500 No alias cyclin d5;1 0.02 Orthogroups_2024-Update
Glyma.12G105600 No alias Cyclin D6;1 0.03 Orthogroups_2024-Update
HORVU3Hr1G105610.3 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU4Hr1G013700.8 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os07g42860 No alias cyclin, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g21450 No alias cyclin, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00001419-RA No alias (at2g22490 : 187.0) encodes a D-type cyclin whose... 0.02 Orthogroups_2024-Update
Potri.006G088300 No alias CYCLIN D7;1 0.03 Orthogroups_2024-Update
Potri.007G005700 No alias CYCLIN D1;1 0.03 Orthogroups_2024-Update
Potri.008G146600 No alias CYCLIN D1;1 0.04 Orthogroups_2024-Update
Potri.011G040900 No alias Cyclin D6;1 0.03 Orthogroups_2024-Update
Sobic.002G190700.2 No alias regulatory protein *(CYCD) of cell cycle 0.01 Orthogroups_2024-Update
Sobic.002G335900.1 No alias regulatory protein *(CYCD) of cell cycle 0.01 Orthogroups_2024-Update
Sobic.005G231400.2 No alias regulatory protein *(CYCD) of cell cycle 0.03 Orthogroups_2024-Update
Sopen01g010480 No alias Cyclin, N-terminal domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
InterPro domains Description Start Stop
IPR006671 Cyclin_N 96 196
IPR004367 Cyclin_C-dom 199 300
No external refs found!