Seita.3G371900.1

Description : transcription factor *(DOF)

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.3G371900.1
Cluster	HCAA Clusters: Cluster_271

Target	Alias	Description	ECC score	Gene Family Method
A4A49_00536	No alias	dof zinc finger protein dof5.7	0.02	Orthogroups_2024-Update
A4A49_12312	No alias	dof zinc finger protein dof2.1	0.03	Orthogroups_2024-Update
At4g38000	No alias	DOF4.7 [Source:UniProtKB/TrEMBL;Acc:A0A178V5K8]	0.05	Orthogroups_2024-Update
At5g60200	No alias	Dof zinc finger protein DOF5.3...	0.02	Orthogroups_2024-Update
Brara.B03736.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Brara.C01888.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Brara.C02339.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.F02115.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.F02200.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Brara.G01208.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.H01664.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
GRMZM2G123900	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
GRMZM2G144172	No alias	OBF-binding protein 3	0.02	Orthogroups_2024-Update
GRMZM2G179069	No alias	OBF-binding protein 3	0.02	Orthogroups_2024-Update
GRMZM5G880268	No alias	OBF-binding protein 3	0.02	Orthogroups_2024-Update
Glyma.08G195300	No alias	DOF zinc finger protein 1	0.02	Orthogroups_2024-Update
Glyma.09G237000	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Glyma.11G151497	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.13G230200	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Glyma.15G039300	No alias	OBF-binding protein 3	0.02	Orthogroups_2024-Update
Glyma.19G118000	No alias	cycling DOF factor 3	0.02	Orthogroups_2024-Update
HORVU3Hr1G116260.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
LOC_Os08g38220	No alias	dof zinc finger domain containing protein, putative, expressed	0.03	Orthogroups_2024-Update
MA_123810g0010	No alias	(at5g60850 : 129.0) Encodes a zinc finger protein.; OBF...	0.03	Orthogroups_2024-Update
MA_18267g0010	No alias	(at5g62940 : 141.0) HCA2 induces the formation of...	0.02	Orthogroups_2024-Update
MA_83624g0010	No alias	(at5g60200 : 114.0) Encodes a Dof-type transcription...	0.03	Orthogroups_2024-Update
PSME_00020524-RA	No alias	(at5g62940 : 135.0) HCA2 induces the formation of...	0.05	Orthogroups_2024-Update
PSME_00040668-RA	No alias	(at5g02460 : 137.0) Dof-type zinc finger DNA-binding...	0.03	Orthogroups_2024-Update
PSME_00056872-RA	No alias	(at5g60200 : 116.0) Encodes a Dof-type transcription...	0.03	Orthogroups_2024-Update
Potri.002G174300	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Potri.004G038800	No alias	OBF binding protein 4	0.04	Orthogroups_2024-Update
Pp1s118_226V6	No alias	f-box family protein	0.03	Orthogroups_2024-Update
Pp1s124_139V6	No alias	zinc finger	0.02	Orthogroups_2024-Update
Sobic.001G489900.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Sobic.003G033500.1	No alias	transcription factor *(DOF)	0.05	Orthogroups_2024-Update
Solyc03g112930	No alias	Dof zinc finger protein (AHRD V3.3 *** A0A0B6VJP1_TOBAC)	0.02	Orthogroups_2024-Update
Sopen02g022790	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen06g027770	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen06g031790	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen09g005390	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0005507	copper ion binding	IEP	Predicted GO
BP	GO:0006308	DNA catabolic process	IEP	Predicted GO
BP	GO:0006508	proteolysis	IEP	Predicted GO
MF	GO:0008233	peptidase activity	IEP	Predicted GO
MF	GO:0008234	cysteine-type peptidase activity	IEP	Predicted GO
CC	GO:0009579	thylakoid	IEP	Predicted GO
MF	GO:0015267	channel activity	IEP	Predicted GO
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predicted GO
MF	GO:0022803	passive transmembrane transporter activity	IEP	Predicted GO
MF	GO:0030599	pectinesterase activity	IEP	Predicted GO
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predicted GO
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Predicted GO
BP	GO:0042545	cell wall modification	IEP	Predicted GO
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Predicted GO
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Predicted GO
BP	GO:0045229	external encapsulating structure organization	IEP	Predicted GO
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Predicted GO
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Predicted GO
BP	GO:0071554	cell wall organization or biogenesis	IEP	Predicted GO
BP	GO:0071555	cell wall organization	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	61	113

External Links

No external refs found!

Seita.3G371900.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation