1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.3G372500.1

Seita.3G372500.1


Description : REM-type transcription factor


Gene families : OG_42_0000707 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000707_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G372500.1
Cluster HCAA Clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Bradi2g60554 No alias AP2/B3-like transcriptional factor family protein 0.05 Orthogroups_2024-Update
GRMZM2G065496 No alias AP2/B3-like transcriptional factor family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G017820.1 No alias REM-type transcription factor 0.03 Orthogroups_2024-Update
Pp1s27_190V6 No alias Vitellogenin-2 precursor (Vitellogenin II) (Major... 0.02 Orthogroups_2024-Update
Seita.7G295000.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 247 343
IPR003340 B3_DNA-bd 30 118
No external refs found!