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  5. Seita.3G374600.1

Seita.3G374600.1


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G374600.1
Cluster HCAA Clusters: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
A4A49_08432 No alias ring-h2 finger protein atl70 0.02 Orthogroups_2024-Update
A4A49_36505 No alias e3 ubiquitin-protein ligase atl6 0.01 Orthogroups_2024-Update
At1g72220 No alias RING-H2 finger protein ATL54... 0.02 Orthogroups_2024-Update
Bradi3g05840 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Brara.B02009.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.H01648.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.I04147.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G340444 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Glyma.06G143100 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G140800 No alias carbon/nitrogen insensitive 1 0.03 Orthogroups_2024-Update
Glyma.09G214600 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.15G157400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G080840.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU6Hr1G091610.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU7Hr1G121570.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.01 Orthogroups_2024-Update
LOC_Os01g11480 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.01 Orthogroups_2024-Update
MA_10436208g0010 No alias (at1g72200 : 100.0) RING/U-box superfamily protein;... 0.01 Orthogroups_2024-Update
MA_904294g0010 No alias (at1g72310 : 107.0) Encodes a putative RING-H2 zinc... 0.02 Orthogroups_2024-Update
Mp7g06030.1 No alias RING-H2-class E3 ligase 0.02 Orthogroups_2024-Update
PSME_00003023-RA No alias (at1g72200 : 141.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
Potri.002G101800 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Potri.016G067900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Seita.1G178800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Seita.2G087800.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 174 217
No external refs found!