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  5. Seita.3G380800.1

Seita.3G380800.1


Description : calcium sensor *(CML)


Gene families : OG_42_0000315 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G380800.1
Cluster HCAA Clusters: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
At3g43810 No alias Calmodulin 7 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPJ2] 0.03 Orthogroups_2024-Update
Brara.C02103.1 No alias calcium sensor *(CML) & calcium sensor *(CaM) 0.09 Orthogroups_2024-Update
Brara.C03895.1 No alias calcium sensor *(CML) 0.02 Orthogroups_2024-Update
GRMZM2G044963 No alias calmodulin 5 0.02 Orthogroups_2024-Update
MA_52889g0010 No alias (at5g37780 : 246.0) encodes a calmodulin that is... 0.02 Orthogroups_2024-Update
Seita.3G196500.1 No alias calcium sensor *(CML) & calcium sensor *(CaM) 0.05 Orthogroups_2024-Update
Sopen10g028690 No alias EF hand 0.03 Orthogroups_2024-Update
Sopen12g034610 No alias EF hand 0.03 Orthogroups_2024-Update
evm.model.tig00021435.44 No alias (at3g43810 : 228.0) EF hand domain protein encodes a... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 91 153
IPR002048 EF_hand_dom 11 73
No external refs found!