Description : Pentatricopeptide repeat-containing protein At4g21300 [Source:UniProtKB/Swiss-Prot;Acc:Q9STE1]
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Arabidopsis release: At4g21300 | |
Cluster | HCCA clusters: Cluster_211 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
106624 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
122334 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
84442 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
98426 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
A4A49_38131 | No alias | pentatricopeptide repeat-containing protein | 0.04 | Orthogroups_2024-Update | |
At3g20730 | No alias | Pentatricopeptide repeat-containing protein At3g20730... | 0.03 | Orthogroups_2024-Update | |
At4g33170 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | Orthogroups_2024-Update | |
Brara.A03178.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Brara.D02088.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Brara.E01751.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Brara.F03378.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
GRMZM2G019689 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.04G203500 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.07G068600 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.10G277600 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.12G001100 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.15G093800 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.20G163300 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G085150.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
HORVU6Hr1G057130.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
LOC_Os01g10800 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os01g68490 | No alias | tetratricopeptide-like helical, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os05g30710 | No alias | pentatricopeptide, putative, expressed | 0.05 | Orthogroups_2024-Update | |
LOC_Os09g38310 | No alias | pentatricopeptide, putative, expressed | 0.03 | Orthogroups_2024-Update | |
MA_16339g0010 | No alias | (at3g57430 : 548.0) Encodes a chloroplast RNA editing... | 0.02 | Orthogroups_2024-Update | |
MA_474261g0010 | No alias | (at3g12770 : 471.0) Encodes a pentatricopeptide repeat... | 0.02 | Orthogroups_2024-Update | |
PSME_00014882-RA | No alias | (at4g13650 : 307.0) Pentatricopeptide repeat (PPR)... | 0.01 | Orthogroups_2024-Update | |
PSME_00042901-RA | No alias | (at4g33170 : 526.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
Seita.3G244400.1 | No alias | RNA editing factor *(MEF32) | 0.01 | Orthogroups_2024-Update | |
Seita.5G405500.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Seita.8G163400.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Solyc12g096510 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
Sopen11g024580 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000041 | transition metal ion transport | IEP | Predicted GO |
MF | GO:0003954 | NADH dehydrogenase activity | IEP | Predicted GO |
MF | GO:0004857 | enzyme inhibitor activity | IEP | Predicted GO |
MF | GO:0005381 | iron ion transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0006826 | iron ion transport | IEP | Predicted GO |
MF | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | IEP | Predicted GO |
BP | GO:0010215 | cellulose microfibril organization | IEP | Predicted GO |
BP | GO:0016049 | cell growth | IEP | Predicted GO |
BP | GO:0030198 | extracellular matrix organization | IEP | Predicted GO |
MF | GO:0030234 | enzyme regulator activity | IEP | Predicted GO |
MF | GO:0030599 | pectinesterase activity | IEP | Predicted GO |
BP | GO:0034755 | iron ion transmembrane transport | IEP | Predicted GO |
BP | GO:0040007 | growth | IEP | Predicted GO |
BP | GO:0042545 | cell wall modification | IEP | Predicted GO |
BP | GO:0043062 | extracellular structure organization | IEP | Predicted GO |
BP | GO:0045229 | external encapsulating structure organization | IEP | Predicted GO |
MF | GO:0046912 | transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | IEP | Predicted GO |
MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0050136 | NADH dehydrogenase (quinone) activity | IEP | Predicted GO |
MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Predicted GO |
BP | GO:0071554 | cell wall organization or biogenesis | IEP | Predicted GO |
BP | GO:0071555 | cell wall organization | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 278 | 302 |
IPR002885 | Pentatricopeptide_repeat | 508 | 538 |
IPR002885 | Pentatricopeptide_repeat | 407 | 430 |
IPR002885 | Pentatricopeptide_repeat | 481 | 506 |
IPR002885 | Pentatricopeptide_repeat | 304 | 348 |
IPR002885 | Pentatricopeptide_repeat | 202 | 250 |
IPR002885 | Pentatricopeptide_repeat | 106 | 148 |
IPR002885 | Pentatricopeptide_repeat | 606 | 656 |
No external refs found! |