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  5. Seita.3G382000.1

Seita.3G382000.1


Description : TCX/CPP-type transcription factor


Gene families : OG_42_0001867 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001867_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G382000.1
Cluster HCAA Clusters: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
Pp1s193_30V6 No alias MWI23.13; CXC domain containing TSO1-like protein 1... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005172 CRC 547 582
IPR005172 CRC 461 497
No external refs found!