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  5. Seita.3G388500.1

Seita.3G388500.1


Description : Unknown function


Gene families : OG_42_0001328 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001328_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G388500.1
Cluster HCAA Clusters: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
Bradi4g04950 No alias Plant protein of unknown function (DUF247) 0.03 Orthogroups_2024-Update
GRMZM2G081603 No alias Plant protein of unknown function (DUF247) 0.03 Orthogroups_2024-Update
LOC_Os01g38380 No alias plant protein of unknown function domain containing... 0.03 Orthogroups_2024-Update
LOC_Os08g02730 No alias plant protein of unknown function domain containing... 0.03 Orthogroups_2024-Update
Seita.3G081800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G236900.1 No alias Unknown function 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004158 DUF247_pln 89 334
No external refs found!