Seita.3G399800.1


Description : Unknown function


Gene families : OG_42_0002839 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002839_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G399800.1
Cluster HCAA Clusters: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
LOC_Os12g43380 No alias thaumatin, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00021393-RA No alias (p31110|tlp_orysa : 217.0) Thaumatin-like protein... 0.02 Orthogroups_2024-Update
PSME_00021394-RA No alias (p31110|tlp_orysa : 215.0) Thaumatin-like protein... 0.02 Orthogroups_2024-Update
PSME_00034789-RA No alias (p31110|tlp_orysa : 226.0) Thaumatin-like protein... 0.05 Orthogroups_2024-Update
PSME_00037959-RA No alias (p31110|tlp_orysa : 207.0) Thaumatin-like protein... 0.03 Orthogroups_2024-Update
PSME_00038889-RA No alias (p31110|tlp_orysa : 225.0) Thaumatin-like protein... 0.02 Orthogroups_2024-Update
PSME_00048368-RA No alias (p31110|tlp_orysa : 205.0) Thaumatin-like protein... 0.02 Orthogroups_2024-Update
Sobic.008G182300.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.008G182600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.008G182700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.008G182800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G183300.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR001938 Thaumatin 28 131
No external refs found!