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  5. Seita.3G403000.1

Seita.3G403000.1


Description : calcium-permeable channel *(OSCA)


Gene families : OG_42_0000192 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G403000.1
Cluster HCAA Clusters: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
A4A49_09861 No alias csc1-like protein rxw8 0.06 Orthogroups_2024-Update
At4g15430 No alias CSC1-like protein At4g15430... 0.04 Orthogroups_2024-Update
Bradi2g39230 No alias ERD (early-responsive to dehydration stress) family protein 0.02 Orthogroups_2024-Update
Bradi4g00860 No alias lipases;hydrolases, acting on ester bonds 0.03 Orthogroups_2024-Update
Brara.A01995.1 No alias calcium-permeable channel *(OSCA) 0.04 Orthogroups_2024-Update
Brara.A02367.1 No alias calcium-permeable channel *(OSCA) 0.05 Orthogroups_2024-Update
Brara.G02874.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
Brara.H00598.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
Brara.H00805.1 No alias calcium-permeable channel *(OSCA) 0.02 Orthogroups_2024-Update
GRMZM2G164470 No alias lipases;hydrolases, acting on ester bonds 0.04 Orthogroups_2024-Update
Glyma.17G232235 No alias lipases;hydrolases, acting on ester bonds 0.04 Orthogroups_2024-Update
Glyma.20G066800 No alias ERD (early-responsive to dehydration stress) family protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G004230.1 No alias calcium-permeable channel *(OSCA) 0.06 Orthogroups_2024-Update
LOC_Os12g43720 No alias early-responsive to dehydration protein-related,... 0.03 Orthogroups_2024-Update
Mp5g05890.1 No alias calcium-permeable channel (OSCA) 0.02 Orthogroups_2024-Update
Potri.008G091200 No alias Early-responsive to dehydration stress protein (ERD4) 0.03 Orthogroups_2024-Update
Pp1s86_71V6 No alias early responsive to dehydration protein 0.03 Orthogroups_2024-Update
Sobic.009G258100.1 No alias calcium-permeable channel *(OSCA) 0.06 Orthogroups_2024-Update
Solyc12g088230 No alias mitochondrial malate dehydrogenase 0.03 Orthogroups_2024-Update
Sopen08g008540 No alias Domain of unknown function DUF221 0.03 Orthogroups_2024-Update
Sopen12g030230 No alias Domain of unknown function DUF221 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005548 phospholipid transporter activity IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
BP GO:0015914 phospholipid transport IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003864 RSN1_7TM 354 621
IPR032880 Csc1_N 6 165
IPR027815 PHM7_cyt 186 343
No external refs found!