1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.3G404400.1

Seita.3G404400.1


Description : Unknown function


Gene families : OG_42_0000408 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000408_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G404400.1
Cluster HCAA Clusters: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G057509 No alias Core-2/I-branching... 0.04 Orthogroups_2024-Update
Potri.001G195900 No alias Core-2/I-branching... 0.03 Orthogroups_2024-Update
Pp1s17_310V6 No alias T1N24.19; hypothetical protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Seita.9G106000.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
MF GO:0016757 transferase activity, transferring glycosyl groups IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR003406 Glyco_trans_14 233 451
No external refs found!