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  5. Seita.3G405900.1

Seita.3G405900.1


Description : UMF23-type solute transporter


Gene families : OG_42_0000169 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000169_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G405900.1
Cluster HCAA Clusters: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
89169 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Brara.G02260.1 No alias UMF23-type solute transporter 0.05 Orthogroups_2024-Update
Glyma.03G185100 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G189400 No alias Nodulin-like / Major Facilitator Superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os12g44070 No alias nodulin, putative, expressed 0.04 Orthogroups_2024-Update
PSME_00015340-RA No alias (at2g39210 : 432.0) Major facilitator superfamily... 0.04 Orthogroups_2024-Update
PSME_00034569-RA No alias (at3g01930 : 350.0) Major facilitator superfamily... 0.05 Orthogroups_2024-Update
PSME_00053948-RA No alias (at2g39210 : 468.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
Seita.9G052200.1 No alias UMF23-type solute transporter 0.04 Orthogroups_2024-Update
Solyc06g011590 No alias Major facilitator superfamily protein (AHRD V3.3 *** AT2G28120.1) 0.02 Orthogroups_2024-Update
Solyc09g008370 No alias LOW QUALITY:Major facilitator superfamily protein (AHRD... 0.04 Orthogroups_2024-Update
Sopen02g017250 No alias Nodulin-like 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR010658 Nodulin-like 16 271
No external refs found!