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  5. Seita.3G407800.1

Seita.3G407800.1


Description : R-type component *(VAMP721/VAMP722) of SNARE cell-plate vesicle fusion complex & R-type VAMP7-group component of SNARE longin membrane fusion complex


Gene families : OG_42_0000264 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G407800.1
Cluster HCAA Clusters: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
80138 No alias vesicle-associated membrane protein 714 0.02 Orthogroups_2024-Update
Bradi1g47940 No alias vesicle-associated membrane protein 713 0.03 Orthogroups_2024-Update
Brara.A00573.1 No alias R-type VAMP7-group component of SNARE longin membrane... 0.02 Orthogroups_2024-Update
GRMZM2G054193 No alias vesicle-associated membrane protein 726 0.03 Orthogroups_2024-Update
Glyma.09G045400 No alias vesicle-associated membrane protein 724 0.04 Orthogroups_2024-Update
Glyma.15G147200 No alias vesicle-associated membrane protein 724 0.03 Orthogroups_2024-Update
Kfl00159_0110 kfl00159_0110_v1.1 (at5g22360 : 261.0) Member of Synaptobrevin-like... 0.03 Orthogroups_2024-Update
LOC_Os07g09600 No alias vesicle-associated membrane protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.010G239900 No alias vesicle-associated membrane protein 727 0.02 Orthogroups_2024-Update
Potri.015G118300 No alias vesicle-associated membrane protein 726 0.04 Orthogroups_2024-Update
Pp1s219_102V6 No alias vesicle-associated membrane 0.04 Orthogroups_2024-Update
Seita.6G243100.1 No alias R-type VAMP7-group component of SNARE longin membrane... 0.03 Orthogroups_2024-Update
Sobic.001G051200.1 No alias R-type component *(VAMP721/VAMP722) of SNARE cell-plate... 0.02 Orthogroups_2024-Update
Solyc12g098180 No alias Vesicle-associated membrane protein, putative (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR010908 Longin_dom 35 110
No external refs found!