Seita.4G012400.1

Description : component *(GRF) of GRF-GIF transcriptional complex

Gene families : OG_42_0000283 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000283_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.4G012400.1
Cluster	HCAA Clusters: Cluster_175

Target	Alias	Description	ECC score	Gene Family Method
A4A49_10904	No alias	growth-regulating factor 5	0.03	Orthogroups_2024-Update
A4A49_15479	No alias	growth-regulating factor 1	0.04	Orthogroups_2024-Update
A4A49_16252	No alias	growth-regulating factor 3	0.02	Orthogroups_2024-Update
A4A49_40190	No alias	growth-regulating factor 10	0.03	Orthogroups_2024-Update
Brara.E00841.1	No alias	component *(GRF) of GRF-GIF transcriptional complex	0.03	Orthogroups_2024-Update
Glyma.14G089090	No alias	growth-regulating factor 1	0.03	Orthogroups_2024-Update
Kfl00027_0430	kfl00027_0430_v1.1	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
LOC_Os03g51970	No alias	growth-regulating factor, putative, expressed	0.02	Orthogroups_2024-Update
Pp1s246_146V6	No alias	tpa: tpa_exp: growth-regulating factor 3	0.02	Orthogroups_2024-Update
Solyc02g092070	No alias	Growth-regulating factor (AHRD V3.3 *** A0A072VEY4_MEDTR)	0.03	Orthogroups_2024-Update
Solyc04g077510	No alias	Growth-regulating factor (AHRD V3.3 *** A0A072VEY4_MEDTR)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	16Dec
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	Predicted GO
MF	GO:0003989	acetyl-CoA carboxylase activity	IEP	Predicted GO
BP	GO:0010024	phytochromobilin biosynthetic process	IEP	Predicted GO
MF	GO:0016160	amylase activity	IEP	Predicted GO
MF	GO:0016161	beta-amylase activity	IEP	Predicted GO
MF	GO:0016421	CoA carboxylase activity	IEP	Predicted GO
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Predicted GO
MF	GO:0016636	oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	IEP	Predicted GO
MF	GO:0016885	ligase activity, forming carbon-carbon bonds	IEP	Predicted GO
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Predicted GO
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Predicted GO
MF	GO:0050897	cobalt ion binding	IEP	Predicted GO
BP	GO:0051202	phytochromobilin metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR014978	Gln-Leu-Gln_QLQ	157	190
IPR014977	WRC_dom	231	273

External Links

No external refs found!

Seita.4G012400.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation