Description : linker histone *(H1)
Gene families : OG_42_0000689 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000689_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Setaria italica: Seita.4G020700.1 | |
Cluster | HCAA Clusters: Cluster_334 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
GRMZM2G080274 | No alias | histone H1-3 | 0.02 | Orthogroups_2024-Update | |
Seita.7G207300.1 | No alias | linker histone *(H1) | 0.02 | Orthogroups_2024-Update | |
Solyc02g084240 | No alias | H1 histone-like protein | 0.01 | Orthogroups_2024-Update | |
Solyc06g084020 | No alias | histone H1 | 0.01 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEA | 16Dec |
MF | GO:0003677 | DNA binding | IEA | 16Dec |
BP | GO:0006334 | nucleosome assembly | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Predicted GO |
BP | GO:0016567 | protein ubiquitination | IEP | Predicted GO |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Predicted GO |
BP | GO:0032446 | protein modification by small protein conjugation | IEP | Predicted GO |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005818 | Histone_H1/H5_H15 | 80 | 148 |
No external refs found! |