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  5. Seita.4G027300.1

Seita.4G027300.1


Description : transcriptional co-activator *(BET/GTE)


Gene families : OG_42_0000275 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000275_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G027300.1
Cluster HCAA Clusters: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Bradi2g34827 No alias bromodomain and extraterminal domain protein 9 0.02 Orthogroups_2024-Update
Bradi3g14160 No alias bromodomain and extraterminal domain protein 9 0.03 Orthogroups_2024-Update
Brara.I00737.1 No alias transcriptional co-activator *(BET/GTE) 0.03 Orthogroups_2024-Update
Cre08.g367300 No alias DNA-binding bromodomain-containing protein 0.01 Orthogroups_2024-Update
Glyma.05G045700 No alias nuclear protein X1 0.02 Orthogroups_2024-Update
Glyma.12G122100 No alias global transcription factor group E4 0.02 Orthogroups_2024-Update
Glyma.12G209100 No alias global transcription factor group E4 0.02 Orthogroups_2024-Update
LOC_Os07g32420 No alias bromodomain domain containing protein, expressed 0.04 Orthogroups_2024-Update
Mp1g20280.1 No alias transcriptional co-activator (BET/GTE) 0.02 Orthogroups_2024-Update
Mp2g14370.1 No alias transcriptional co-activator (BET/GTE) 0.02 Orthogroups_2024-Update
Sobic.002G313300.1 No alias transcriptional co-activator *(BET/GTE) 0.04 Orthogroups_2024-Update
Solyc02g071510 No alias Transcription factor GTE12-like protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
evm.model.contig_3458.5 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Predicted GO
MF GO:0003725 double-stranded RNA binding IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004619 phosphoglycerate mutase activity IEP Predicted GO
CC GO:0005685 U1 snRNP IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006376 mRNA splice site selection IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0016255 attachment of GPI anchor to protein IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
MF GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001487 Bromodomain 86 170
IPR027353 NET_dom 244 306
No external refs found!