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  5. Seita.4G040000.1

Seita.4G040000.1


Description : Hsp60-co-chaperone *(Hsp20) & auxiliary co-chaperone involved in RuBisCo assembly *(CPN20)


Gene families : OG_42_0002026 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002026_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G040000.1
Cluster HCAA Clusters: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
At5g20720 No alias 20 kDa chaperonin, chloroplastic... 0.02 Orthogroups_2024-Update
Bradi3g60027 No alias chaperonin 20 0.04 Orthogroups_2024-Update
Bradi4g31220 No alias chaperonin 20 0.03 Orthogroups_2024-Update
Brara.B00904.1 No alias auxiliary co-chaperone involved in RuBisCo assembly... 0.03 Orthogroups_2024-Update
Brara.C00948.1 No alias auxiliary co-chaperone involved in RuBisCo assembly... 0.04 Orthogroups_2024-Update
Brara.J01552.1 No alias auxiliary co-chaperone involved in RuBisCo assembly... 0.04 Orthogroups_2024-Update
Cre12.g505850 No alias chaperonin 20 0.01 Orthogroups_2024-Update
GRMZM2G127609 No alias chaperonin 20 0.04 Orthogroups_2024-Update
Glyma.09G072100 No alias chaperonin 20 0.04 Orthogroups_2024-Update
Glyma.15G180900 No alias chaperonin 20 0.05 Orthogroups_2024-Update
HORVU5Hr1G062310.1 No alias auxiliary co-chaperone involved in RuBisCo assembly... 0.05 Orthogroups_2024-Update
Sobic.002G214600.1 No alias Hsp60-co-chaperone *(Hsp20) & auxiliary co-chaperone... 0.04 Orthogroups_2024-Update
Sobic.010G073700.1 No alias Hsp60-co-chaperone *(Hsp20) & auxiliary co-chaperone... 0.07 Orthogroups_2024-Update
Solyc07g042250 No alias chaperonin 21 precursor 0.03 Orthogroups_2024-Update
Solyc12g009250 No alias Chaperonin (AHRD V3.3 *** Q69QD5_ORYSJ) 0.07 Orthogroups_2024-Update
Sopen07g021870 No alias Chaperonin 10 Kd subunit 0.02 Orthogroups_2024-Update
Sopen12g004210 No alias Chaperonin 10 Kd subunit 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
BP GO:0006457 protein folding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004455 ketol-acid reductoisomerase activity IEP Predicted GO
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006553 lysine metabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
BP GO:0009085 lysine biosynthetic process IEP Predicted GO
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0046451 diaminopimelate metabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR020818 Chaperonin_GroES 149 240
IPR020818 Chaperonin_GroES 51 140
No external refs found!