Seita.4G042100.1

Description : EC_3.1 hydrolase acting on ester bond & pectin methylesterase

Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.4G042100.1
Cluster	HCAA Clusters: Cluster_6

Target	Alias	Description	ECC score	Gene Family Method
Glyma.02G016500	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.08	Orthogroups_2024-Update
Glyma.06G128500	No alias	pectin methylesterase PCR fragment F	0.02	Orthogroups_2024-Update
LOC_Os01g13320	No alias	pectinesterase, putative, expressed	0.03	Orthogroups_2024-Update
PSME_00024239-RA	No alias	(at4g02330 : 466.0) ATPMEPCRB; FUNCTIONS IN:...	0.03	Orthogroups_2024-Update
PSME_00039059-RA	No alias	(o04886\|pme1_citsi : 432.0) Pectinesterase-1 precursor...	0.03	Orthogroups_2024-Update
PSME_00039060-RA	No alias	(o04886\|pme1_citsi : 432.0) Pectinesterase-1 precursor...	0.03	Orthogroups_2024-Update
Potri.018G051200	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.02	Orthogroups_2024-Update
Sopen03g023110	No alias	Pectinesterase	0.04	Orthogroups_2024-Update
Sopen06g003960	No alias	Pectinesterase	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004857	enzyme inhibitor activity	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	16Dec
BP	GO:0042545	cell wall modification	IEA	16Dec
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0098772	molecular function regulator	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
BP	GO:0006629	lipid metabolic process	IEP	Predicted GO
MF	GO:0008168	methyltransferase activity	IEP	Predicted GO
MF	GO:0008289	lipid binding	IEP	Predicted GO
BP	GO:0008610	lipid biosynthetic process	IEP	Predicted GO
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Predicted GO
MF	GO:0019899	enzyme binding	IEP	Predicted GO
MF	GO:0051020	GTPase binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006501	Pectinesterase_inhib_dom	81	245
IPR000070	Pectinesterase_cat	309	603

External Links

No external refs found!