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  5. Seita.4G049200.1

Seita.4G049200.1


Description : deubiquitinase *(UBP23)


Gene families : OG_42_0000241 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000241_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G049200.1
Cluster HCAA Clusters: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
A4A49_01885 No alias ubiquitin carboxyl-terminal hydrolase 25 0.01 Orthogroups_2024-Update
A4A49_07781 No alias ubiquitin carboxyl-terminal hydrolase 16 0.02 Orthogroups_2024-Update
At4g31670 No alias Ubiquitin carboxyl-terminal hydrolase 18... 0.02 Orthogroups_2024-Update
Bradi1g31187 No alias ubiquitin-specific protease 19 0.03 Orthogroups_2024-Update
Bradi3g38400 No alias ubiquitin-specific protease 17 0.03 Orthogroups_2024-Update
Bradi3g54040 No alias ubiquitin-specific protease 23 0.03 Orthogroups_2024-Update
Cre06.g248950 No alias ubiquitin-specific protease 18 0.01 Orthogroups_2024-Update
Glyma.04G091700 No alias ubiquitin-specific protease 16 0.03 Orthogroups_2024-Update
HORVU7Hr1G030300.1 No alias deubiquitinase *(UBP23) 0.05 Orthogroups_2024-Update
HORVU7Hr1G111430.5 No alias deubiquitinase *(UBP15-21) 0.03 Orthogroups_2024-Update
Potri.018G107500 No alias ubiquitin-specific protease 23 0.03 Orthogroups_2024-Update
Sopen12g032270 No alias Ubiquitin carboxyl-terminal hydrolase 0.02 Orthogroups_2024-Update
evm.model.tig00000808.46 No alias (at2g14120 : 241.0) Encodes a dynamin related protein.... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEA 16Dec
BP GO:0016579 protein deubiquitination IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003714 transcription corepressor activity IEP Predicted GO
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004619 phosphoglycerate mutase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016151 nickel cation binding IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
BP GO:0019627 urea metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
CC GO:0035550 urease complex IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
BP GO:0043419 urea catabolic process IEP Predicted GO
BP GO:0043605 cellular amide catabolic process IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
MF GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 91 391
No external refs found!