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  5. Seita.4G057600.1

Seita.4G057600.1


Description : substrate adaptor of CUL4-based E3 ubiquitin ligase complex


Gene families : OG_42_0000776 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000776_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G057600.1
Cluster HCAA Clusters: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Bradi3g39450 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G097500 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.04G112700 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Solyc10g005730 No alias Transducin/WD40 repeat-like superfamily protein (AHRD... 0.03 Orthogroups_2024-Update
Sopen09g036250 No alias WD domain, G-beta repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006906 vesicle fusion IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007030 Golgi organization IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016050 vesicle organization IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0048280 vesicle fusion with Golgi apparatus IEP Predicted GO
BP GO:0048284 organelle fusion IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0061025 membrane fusion IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0061666 UFM1 ligase activity IEP Predicted GO
MF GO:0071568 UFM1 transferase activity IEP Predicted GO
BP GO:0071569 protein ufmylation IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0090174 organelle membrane fusion IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 319 356
No external refs found!