Seita.4G084600.1

Description : HD-ZIP IV-type transcription factor

Gene families : OG_42_0000114 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.4G084600.1
Cluster	HCAA Clusters: Cluster_139

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g46247	No alias	homeodomain GLABROUS 11	0.06	Orthogroups_2024-Update
MA_110607g0010	No alias	(at1g05230 : 214.0) Encodes a homeobox-leucine zipper...	0.06	Orthogroups_2024-Update
Mp7g09710.1	No alias	transcription factor (HD-ZIP IV)	0.04	Orthogroups_2024-Update
Solyc03g120620	No alias	Homeobox leucine zipper protein (AHRD V3.3 *** G7IUR3_MEDTR)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0008289	lipid binding	IEA	16Dec
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	16	71
IPR002913	START_lipid-bd_dom	214	438

External Links

No external refs found!