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  5. Seita.4G086300.1

Seita.4G086300.1


Description : Unknown function


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G086300.1
Cluster HCAA Clusters: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
A4A49_08715 No alias myb-related protein pp2 0.02 Orthogroups_2024-Update
A4A49_11057 No alias transcription factor myb86 0.03 Orthogroups_2024-Update
A4A49_28008 No alias transcription repressor myb5 0.03 Orthogroups_2024-Update
A4A49_35836 No alias transcription factor myb30 0.04 Orthogroups_2024-Update
At1g66230 No alias Transcription factor MYB20... 0.04 Orthogroups_2024-Update
At4g38620 No alias Transcription repressor MYB4... 0.03 Orthogroups_2024-Update
At5g16770 No alias Myb domain protein 9 [Source:UniProtKB/TrEMBL;Acc:F4KE69] 0.02 Orthogroups_2024-Update
At5g59780 No alias Transcription factor MYB59... 0.03 Orthogroups_2024-Update
Bradi2g11676 No alias myb domain protein 12 0.04 Orthogroups_2024-Update
Bradi3g42350 No alias myb domain protein 7 0.02 Orthogroups_2024-Update
Bradi4g04627 No alias myb domain protein 112 0.03 Orthogroups_2024-Update
Bradi4g09900 No alias myb domain protein 112 0.03 Orthogroups_2024-Update
Bradi4g23967 No alias myb domain protein 4 0.04 Orthogroups_2024-Update
Bradi4g36460 No alias myb domain protein 4 0.04 Orthogroups_2024-Update
Brara.E00069.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Brara.F01573.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.04 Orthogroups_2024-Update
Brara.G03164.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Brara.J01871.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G131442 No alias myb domain protein 112 0.02 Orthogroups_2024-Update
GRMZM2G143046 No alias myb domain protein 112 0.04 Orthogroups_2024-Update
Glyma.03G221700 No alias myb domain protein 2 0.03 Orthogroups_2024-Update
Glyma.04G205100 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Glyma.06G300200 No alias myb domain protein 14 0.03 Orthogroups_2024-Update
Glyma.11G194100 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Glyma.13G050400 No alias myb domain protein 83 0.03 Orthogroups_2024-Update
Glyma.13G247200 No alias MYB-like 102 0.04 Orthogroups_2024-Update
Glyma.13G333200 No alias myb domain protein 48 0.03 Orthogroups_2024-Update
Glyma.14G090900 No alias myb domain protein 84 0.03 Orthogroups_2024-Update
LOC_Os02g42870 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g50770 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g46610 No alias myb-like DNA-binding domain containing protein,... 0.02 Orthogroups_2024-Update
LOC_Os06g02250 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g48870 No alias MYB family transcription factor, putative, expressed 0.05 Orthogroups_2024-Update
MA_8356281g0010 No alias (at3g13540 : 224.0) Encodes a member of the MYB family... 0.04 Orthogroups_2024-Update
MA_9818613g0010 No alias (p10290|mybc_maize : 180.0) Anthocyanin regulatory C1... 0.05 Orthogroups_2024-Update
PSME_00030815-RA No alias (at1g09540 : 235.0) Encodes putative transcription... 0.03 Orthogroups_2024-Update
PSME_00050182-RA No alias (p10290|mybc_maize : 191.0) Anthocyanin regulatory C1... 0.03 Orthogroups_2024-Update
PSME_00050915-RA No alias (at1g74650 : 283.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00051767-RA No alias (at4g38620 : 243.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
Potri.005G164900 No alias myb domain protein 93 0.03 Orthogroups_2024-Update
Potri.011G125900 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Pp1s106_216V6 No alias atmyb16 (myb domain protein 16) dna binding transcription factor 0.03 Orthogroups_2024-Update
Pp1s277_14V6 No alias myb55 (myb domain protein 55) dna binding transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G337800.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.05 Orthogroups_2024-Update
Sopen02g032700 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen05g031840 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 111
No external refs found!