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  5. Seita.4G087700.1

Seita.4G087700.1


Description : regulatory protein *(CYCD) of cell cycle


Gene families : OG_42_0000136 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G087700.1
Cluster HCAA Clusters: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
Glyma.08G280600 No alias CYCLIN D4;1 0.05 Orthogroups_2024-Update
Glyma.17G238400 No alias CYCLIN D3;1 0.03 Orthogroups_2024-Update
MA_93221g0010 No alias (at1g70210 : 231.0) Encodes a D-type cyclin that... 0.03 Orthogroups_2024-Update
Sopen05g002080 No alias Cyclin, N-terminal domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 198 288
IPR006671 Cyclin_N 66 195
No external refs found!