1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.4G089800.1

Seita.4G089800.1


Description : plasma membrane intrinsic protein *(PIP)


Gene families : OG_42_0000132 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G089800.1
Cluster HCAA Clusters: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
270916 No alias plasma membrane intrinsic protein 2;8 0.02 Orthogroups_2024-Update
Bradi3g18460 No alias plasma membrane intrinsic protein 2;5 0.03 Orthogroups_2024-Update
GRMZM2G092125 No alias plasma membrane intrinsic protein 2 0.02 Orthogroups_2024-Update
Glyma.11G228000 No alias plasma membrane intrinsic protein 1;4 0.03 Orthogroups_2024-Update
Glyma.13G325900 No alias plasma membrane intrinsic protein 2 0.04 Orthogroups_2024-Update
Glyma.16G155000 No alias plasma membrane intrinsic protein 2 0.03 Orthogroups_2024-Update
HORVU0Hr1G014490.1 No alias plasma membrane intrinsic protein *(PIP) 0.04 Orthogroups_2024-Update
PSME_00005911-RA No alias (at2g16850 : 364.0) plasma membrane intrinsic protein... 0.03 Orthogroups_2024-Update
PSME_00005913-RA No alias (at2g16850 : 358.0) plasma membrane intrinsic protein... 0.03 Orthogroups_2024-Update
Potri.005G109200 No alias plasma membrane intrinsic protein 3 0.03 Orthogroups_2024-Update
Potri.016G113300 No alias plasma membrane intrinsic protein 1;4 0.02 Orthogroups_2024-Update
Pp1s1_535V6 No alias plasma membrane aquaporin 0.02 Orthogroups_2024-Update
Seita.9G219400.1 No alias plasma membrane intrinsic protein *(PIP) 0.03 Orthogroups_2024-Update
Solyc06g011350 No alias plasma membrane intrinsic protein 2.4 0.02 Orthogroups_2024-Update
Sopen01g038500 No alias Major intrinsic protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0004451 isocitrate lyase activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
CC GO:0005666 RNA polymerase III complex IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006383 transcription by RNA polymerase III IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016833 oxo-acid-lyase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
InterPro domains Description Start Stop
IPR000425 MIP 54 284
No external refs found!