Seita.4G092000.1

Description : mTERF-type transcription factor

Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.4G092000.1
Cluster	HCAA Clusters: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
444400	No alias	plastid transcriptionally active 15	0.04	Orthogroups_2024-Update
A4A49_21032	No alias	hypothetical protein	0.08	Orthogroups_2024-Update
A4A49_33246	No alias	hypothetical protein	0.01	Orthogroups_2024-Update
A4A49_33929	No alias	transcription termination factor mterf8, chloroplastic	0.01	Orthogroups_2024-Update
At1g62010	No alias	F8K4.20 protein [Source:UniProtKB/TrEMBL;Acc:O80705]	0.04	Orthogroups_2024-Update
At1g62490	No alias	Mitochondrial transcription termination factor family...	0.02	Orthogroups_2024-Update
At5g07900	No alias	Mitochondrial transcription termination factor family...	0.02	Orthogroups_2024-Update
At5g64950	No alias	Emb [Source:UniProtKB/TrEMBL;Acc:Q9LV83]	0.05	Orthogroups_2024-Update
Bradi1g16160	No alias	Mitochondrial transcription termination factor family protein	0.06	Orthogroups_2024-Update
Bradi1g45338	No alias	Mitochondrial transcription termination factor family protein	0.01	Orthogroups_2024-Update
Bradi3g00830	No alias	Mitochondrial transcription termination factor family protein	0.04	Orthogroups_2024-Update
Bradi3g59167	No alias	Mitochondrial transcription termination factor family protein	0.01	Orthogroups_2024-Update
Bradi4g20547	No alias	Mitochondrial transcription termination factor family protein	0.05	Orthogroups_2024-Update
Bradi4g23197	No alias	Mitochondrial transcription termination factor family protein	0.02	Orthogroups_2024-Update
Brara.A02580.1	No alias	mTERF-type transcription factor	0.06	Orthogroups_2024-Update
Brara.C04011.1	No alias	mTERF-type transcription factor	0.03	Orthogroups_2024-Update
Brara.E03356.1	No alias	mTERF-type transcription factor	0.02	Orthogroups_2024-Update
Brara.I01450.1	No alias	mTERF-type transcription factor	0.02	Orthogroups_2024-Update
Brara.I01477.1	No alias	mTERF-type transcription factor	0.03	Orthogroups_2024-Update
Glyma.08G306100	No alias	Mitochondrial transcription termination factor family protein	0.04	Orthogroups_2024-Update
Glyma.09G046000	No alias	Mitochondrial transcription termination factor family protein	0.02	Orthogroups_2024-Update
Glyma.15G153150	No alias	Mitochondrial transcription termination factor family protein	0.04	Orthogroups_2024-Update
Glyma.15G153400	No alias	Mitochondrial transcription termination factor family protein	0.02	Orthogroups_2024-Update
Glyma.16G085500	No alias	Mitochondrial transcription termination factor family protein	0.01	Orthogroups_2024-Update
Glyma.17G024500	No alias	Mitochondrial transcription termination factor family protein	0.04	Orthogroups_2024-Update
HORVU2Hr1G024310.1	No alias	mTERF-type transcription factor	0.1	Orthogroups_2024-Update
HORVU2Hr1G116050.1	No alias	mTERF-type transcription factor	0.05	Orthogroups_2024-Update
HORVU5Hr1G056910.1	No alias	mTERF-type transcription factor	0.04	Orthogroups_2024-Update
HORVU6Hr1G003510.2	No alias	mTERF-type transcription factor	0.03	Orthogroups_2024-Update
HORVU6Hr1G003570.23	No alias	mTERF-type transcription factor	0.04	Orthogroups_2024-Update
HORVU6Hr1G005710.1	No alias	mTERF-type transcription factor	0.04	Orthogroups_2024-Update
HORVU6Hr1G075340.1	No alias	mTERF-type transcription factor	0.09	Orthogroups_2024-Update
HORVU7Hr1G081400.3	No alias	mTERF-type transcription factor	0.05	Orthogroups_2024-Update
LOC_Os02g51450	No alias	mTERF family protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os05g34160	No alias	mTERF domain containing protein, expressed	0.04	Orthogroups_2024-Update
LOC_Os07g24090	No alias	mTERF domain containing protein, expressed	0.01	Orthogroups_2024-Update
LOC_Os08g40710	No alias	retrotransposon protein, putative, unclassified, expressed	0.02	Orthogroups_2024-Update
LOC_Os11g09990	No alias	mTERF family protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os11g10000	No alias	mTERF family protein, expressed	0.01	Orthogroups_2024-Update
MA_178046g0010	No alias	(at5g64950 : 104.0) Mitochondrial transcription...	0.04	Orthogroups_2024-Update
MA_26585g0010	No alias	(at5g64950 : 83.2) Mitochondrial transcription...	0.06	Orthogroups_2024-Update
MA_760114g0010	No alias	(at5g64950 : 80.1) Mitochondrial transcription...	0.01	Orthogroups_2024-Update
MA_804585g0010	No alias	(at5g64950 : 91.3) Mitochondrial transcription...	0.04	Orthogroups_2024-Update
PSME_00000442-RA	No alias	no hits & (original description: no original description)	0.09	Orthogroups_2024-Update
PSME_00000445-RA	No alias	(at5g64950 : 86.7) Mitochondrial transcription...	0.01	Orthogroups_2024-Update
PSME_00009256-RA	No alias	(at1g62110 : 82.4) Mitochondrial transcription...	0.11	Orthogroups_2024-Update
PSME_00019792-RA	No alias	(at1g79220 : 99.0) Mitochondrial transcription...	0.03	Orthogroups_2024-Update
PSME_00020293-RA	No alias	(at5g23930 : 110.0) Mitochondrial transcription...	0.01	Orthogroups_2024-Update
PSME_00023020-RA	No alias	(at1g79220 : 108.0) Mitochondrial transcription...	0.02	Orthogroups_2024-Update
PSME_00030142-RA	No alias	(at5g64950 : 89.4) Mitochondrial transcription...	0.06	Orthogroups_2024-Update
PSME_00032600-RA	No alias	(at5g64950 : 90.5) Mitochondrial transcription...	0.03	Orthogroups_2024-Update
PSME_00042470-RA	No alias	(at1g79220 : 96.3) Mitochondrial transcription...	0.02	Orthogroups_2024-Update
PSME_00049593-RA	No alias	(at5g64950 : 87.0) Mitochondrial transcription...	0.01	Orthogroups_2024-Update
PSME_00056046-RA	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
PSME_00056135-RA	No alias	(at1g79220 : 100.0) Mitochondrial transcription...	0.02	Orthogroups_2024-Update
PSME_00056620-RA	No alias	(at1g79220 : 139.0) Mitochondrial transcription...	0.09	Orthogroups_2024-Update
PSME_00057103-RA	No alias	(at3g46950 : 137.0) Mitochondrial transcription...	0.03	Orthogroups_2024-Update
Potri.001G034500	No alias	Mitochondrial transcription termination factor family protein	0.02	Orthogroups_2024-Update
Potri.003G190700	No alias	Mitochondrial transcription termination factor family protein	0.01	Orthogroups_2024-Update
Potri.008G216200	No alias	Mitochondrial transcription termination factor family protein	0.01	Orthogroups_2024-Update
Potri.012G046700	No alias	Mitochondrial transcription termination factor family protein	0.02	Orthogroups_2024-Update
Potri.014G133200	No alias	Mitochondrial transcription termination factor family protein	0.01	Orthogroups_2024-Update
Potri.015G038400	No alias	Mitochondrial transcription termination factor family protein	0.04	Orthogroups_2024-Update
Pp1s219_66V6	No alias	No description available	0.04	Orthogroups_2024-Update
Seita.1G321000.1	No alias	mTERF-type transcription factor	0.01	Orthogroups_2024-Update
Seita.2G184700.1	No alias	mTERF-type transcription factor	0.11	Orthogroups_2024-Update
Seita.4G094400.1	No alias	mTERF-type transcription factor	0.11	Orthogroups_2024-Update
Seita.4G095000.1	No alias	mTERF-type transcription factor	0.08	Orthogroups_2024-Update
Seita.4G095900.1	No alias	mTERF-type transcription factor	0.01	Orthogroups_2024-Update
Seita.6G130600.1	No alias	mTERF-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.002G179800.1	No alias	mTERF-type transcription factor	0.11	Orthogroups_2024-Update
Sobic.007G114700.3	No alias	mTERF-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.009G131550.1	No alias	mTERF-type transcription factor	0.03	Orthogroups_2024-Update
Solyc02g067960	No alias	Mitochondrial transcription termination factor family...	0.04	Orthogroups_2024-Update
Solyc04g072490	No alias	Epidermal patterning factor (AHRD V3.3 *** A0A072V8D7_MEDTR)	0.05	Orthogroups_2024-Update
Solyc04g072550	No alias	Transcription termination factor, mitochondrial (AHRD...	0.03	Orthogroups_2024-Update
Solyc11g022600	No alias	Mitochondrial transcription termination factor-like...	0.01	Orthogroups_2024-Update
Solyc12g010650	No alias	Mitochondrial transcription termination factor family...	0.01	Orthogroups_2024-Update
Sopen04g005870	No alias	mTERF	0.02	Orthogroups_2024-Update
Sopen04g028690	No alias	mTERF	0.03	Orthogroups_2024-Update
Sopen04g028710	No alias	mTERF	0.04	Orthogroups_2024-Update
Sopen04g028730	No alias	mTERF	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003690	MTERF	230	340

External Links

No external refs found!

Seita.4G092000.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation