Seita.4G093200.1


Description : MADS/AGL-type transcription factor


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G093200.1

Target Alias Description ECC score Gene Family Method Actions
A4A49_09228 No alias mads-box protein jointless 0.03 Orthogroups_2024-Update
A4A49_27621 No alias agamous-like mads-box protein agl9 0.01 Orthogroups_2024-Update
At1g01530 No alias AGL28 [Source:UniProtKB/TrEMBL;Acc:A0A178WE04] 0.01 Orthogroups_2024-Update
At1g69120 No alias AP1 [Source:UniProtKB/TrEMBL;Acc:A0A178W846] 0.03 Orthogroups_2024-Update
At1g77950 No alias AGAMOUS-like 67 [Source:UniProtKB/TrEMBL;Acc:F4I8L6] 0.02 Orthogroups_2024-Update
At5g20240 No alias Floral homeotic protein PISTILLATA... 0.03 Orthogroups_2024-Update
At5g23260 No alias K-box region and MADS-box transcription factor family... 0.01 Orthogroups_2024-Update
Brara.C01460.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Brara.C04259.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.I02103.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.02 Orthogroups_2024-Update
Brara.I02486.1 No alias MADS/AGL-type transcription factor 0.01 Orthogroups_2024-Update
Brara.K01743.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.01G064100 No alias K-box region and MADS-box transcription factor family protein 0.05 Orthogroups_2024-Update
Glyma.05G227300 No alias AGAMOUS-like 62 0.02 Orthogroups_2024-Update
Glyma.08G310100 No alias K-box region and MADS-box transcription factor family protein 0.01 Orthogroups_2024-Update
Glyma.10G085100 No alias AGAMOUS-like 62 0.01 Orthogroups_2024-Update
Glyma.10G240500 No alias AGAMOUS-like 42 0.01 Orthogroups_2024-Update
Glyma.18G004700 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G095710.1 No alias MADS/AGL-type transcription factor 0.01 Orthogroups_2024-Update
HORVU7Hr1G081070.1 No alias MADS/AGL-type transcription factor 0.04 Orthogroups_2024-Update
HORVU7Hr1G081190.1 No alias MADS/AGL-type transcription factor 0.04 Orthogroups_2024-Update
MA_458668g0010 No alias (at2g45660 : 100.0) Controls flowering and is required... 0.01 Orthogroups_2024-Update
MA_95674g0010 No alias (at2g45660 : 104.0) Controls flowering and is required... 0.01 Orthogroups_2024-Update
Potri.001G112400 No alias AGAMOUS-like 19 0.02 Orthogroups_2024-Update
Potri.004G064300 No alias K-box region and MADS-box transcription factor family protein 0.01 Orthogroups_2024-Update
Potri.004G130900 No alias AGAMOUS-like 62 0.02 Orthogroups_2024-Update
Potri.007G115000 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Pp1s34_373V6 No alias mikc* mads-box transcription factor 0.01 Orthogroups_2024-Update
Sobic.001G086500.1 No alias regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.04 Orthogroups_2024-Update
Sobic.001G455900.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.04 Orthogroups_2024-Update
Solyc10g017640 No alias MADS-box transcription factor (AHRD V3.3 *-* G7L1F7_MEDTR) 0.03 Orthogroups_2024-Update
Sopen03g033910 No alias K-box region 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0046983 protein dimerization activity IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
No external refs found!