Seita.4G095000.1


Description : mTERF-type transcription factor


Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G095000.1
Cluster HCAA Clusters: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
444400 No alias plastid transcriptionally active 15 0.04 Orthogroups_2024-Update
At1g62010 No alias F8K4.20 protein [Source:UniProtKB/TrEMBL;Acc:O80705] 0.04 Orthogroups_2024-Update
At5g64950 No alias Emb [Source:UniProtKB/TrEMBL;Acc:Q9LV83] 0.1 Orthogroups_2024-Update
Bradi1g16160 No alias Mitochondrial transcription termination factor family protein 0.05 Orthogroups_2024-Update
Bradi3g00830 No alias Mitochondrial transcription termination factor family protein 0.03 Orthogroups_2024-Update
Bradi4g20547 No alias Mitochondrial transcription termination factor family protein 0.05 Orthogroups_2024-Update
Bradi4g23197 No alias Mitochondrial transcription termination factor family protein 0.02 Orthogroups_2024-Update
Brara.A02580.1 No alias mTERF-type transcription factor 0.05 Orthogroups_2024-Update
Brara.C04011.1 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
Brara.E03356.1 No alias mTERF-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I01450.1 No alias mTERF-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I01477.1 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.08G275900 No alias Mitochondrial transcription termination factor family protein 0.03 Orthogroups_2024-Update
Glyma.08G306100 No alias Mitochondrial transcription termination factor family protein 0.04 Orthogroups_2024-Update
Glyma.15G153150 No alias Mitochondrial transcription termination factor family protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G024310.1 No alias mTERF-type transcription factor 0.08 Orthogroups_2024-Update
HORVU2Hr1G116050.1 No alias mTERF-type transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G056910.1 No alias mTERF-type transcription factor 0.04 Orthogroups_2024-Update
HORVU6Hr1G003570.23 No alias mTERF-type transcription factor 0.04 Orthogroups_2024-Update
HORVU6Hr1G005710.1 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G075340.1 No alias mTERF-type transcription factor 0.07 Orthogroups_2024-Update
HORVU7Hr1G081400.3 No alias mTERF-type transcription factor 0.04 Orthogroups_2024-Update
LOC_Os08g40710 No alias retrotransposon protein, putative, unclassified, expressed 0.04 Orthogroups_2024-Update
LOC_Os11g09990 No alias mTERF family protein, expressed 0.03 Orthogroups_2024-Update
MA_178046g0010 No alias (at5g64950 : 104.0) Mitochondrial transcription... 0.04 Orthogroups_2024-Update
MA_26585g0010 No alias (at5g64950 : 83.2) Mitochondrial transcription... 0.05 Orthogroups_2024-Update
MA_804585g0010 No alias (at5g64950 : 91.3) Mitochondrial transcription... 0.04 Orthogroups_2024-Update
PSME_00019792-RA No alias (at1g79220 : 99.0) Mitochondrial transcription... 0.03 Orthogroups_2024-Update
PSME_00020293-RA No alias (at5g23930 : 110.0) Mitochondrial transcription... 0.02 Orthogroups_2024-Update
PSME_00030142-RA No alias (at5g64950 : 89.4) Mitochondrial transcription... 0.05 Orthogroups_2024-Update
PSME_00056620-RA No alias (at1g79220 : 139.0) Mitochondrial transcription... 0.07 Orthogroups_2024-Update
Potri.003G190700 No alias Mitochondrial transcription termination factor family protein 0.02 Orthogroups_2024-Update
Potri.015G038400 No alias Mitochondrial transcription termination factor family protein 0.03 Orthogroups_2024-Update
Pp1s219_66V6 No alias No description available 0.03 Orthogroups_2024-Update
Seita.4G092000.1 No alias mTERF-type transcription factor 0.08 Orthogroups_2024-Update
Seita.4G094400.1 No alias mTERF-type transcription factor 0.08 Orthogroups_2024-Update
Seita.6G130600.1 No alias mTERF-type transcription factor 0.08 Orthogroups_2024-Update
Sobic.002G179800.1 No alias mTERF-type transcription factor 0.18 Orthogroups_2024-Update
Sobic.007G114700.3 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G131550.1 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
Solyc04g072550 No alias Transcription termination factor, mitochondrial (AHRD... 0.02 Orthogroups_2024-Update
Sopen04g028690 No alias mTERF 0.02 Orthogroups_2024-Update
Sopen04g028710 No alias mTERF 0.03 Orthogroups_2024-Update
Sopen04g028730 No alias mTERF 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004834 tryptophan synthase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003690 MTERF 249 353
IPR003690 MTERF 165 244
No external refs found!