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  5. Seita.4G095400.1

Seita.4G095400.1


Description : mTERF-type transcription factor


Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G095400.1
Cluster HCAA Clusters: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
HORVU1Hr1G061360.1 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
PSME_00023020-RA No alias (at1g79220 : 108.0) Mitochondrial transcription... 0.03 Orthogroups_2024-Update
PSME_00030169-RA No alias (at1g79220 : 119.0) Mitochondrial transcription... 0.03 Orthogroups_2024-Update
PSME_00053051-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.001G030300 No alias Mitochondrial transcription termination factor family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003690 MTERF 171 354
No external refs found!