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  5. Seita.4G097900.1

Seita.4G097900.1


Description : TCP-type transcription factor


Gene families : OG_42_0000261 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G097900.1
Cluster HCAA Clusters: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
A4A49_39012 No alias transcription factor tcp8 0.02 Orthogroups_2024-Update
Brara.B01992.1 No alias TCP-type transcription factor 0.05 Orthogroups_2024-Update
Glyma.06G193000 No alias TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.03 Orthogroups_2024-Update
Sobic.003G408400.1 No alias circadian clock activation factor *(TCP20) & TCP-type... 0.04 Orthogroups_2024-Update
Sobic.004G354700.1 No alias circadian clock repression factor *(CHE) & TCP-type... 0.03 Orthogroups_2024-Update
Sobic.010G092100.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Sopen03g035250 No alias TCP family transcription factor 0.02 Orthogroups_2024-Update
Sopen11g010700 No alias TCP family transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 62 234
No external refs found!