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  5. Seita.4G101300.1

Seita.4G101300.1


Description : auxin efflux transporter *(PIN) & auxin transporter *(PIN)


Gene families : OG_42_0000235 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000235_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G101300.1
Cluster HCAA Clusters: Cluster_295

Target Alias Description ECC score Gene Family Method Actions
Bradi3g59520 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Bradi4g26300 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
GRMZM2G126260 No alias Auxin efflux carrier family protein 0.02 Orthogroups_2024-Update
PSME_00001452-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00020548-RA No alias (at5g57090 : 686.0) Encodes an auxin efflux carrier that... 0.02 Orthogroups_2024-Update
Potri.008G129400 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Seita.5G241500.1 No alias auxin efflux transporter *(PIN) & auxin transporter *(PIN) 0.02 Orthogroups_2024-Update
Seita.7G323600.1 No alias auxin efflux transporter *(PIN) & auxin transporter *(PIN) 0.03 Orthogroups_2024-Update
Seita.8G021700.1 No alias auxin efflux transporter *(PIN) & auxin transporter *(PIN) 0.02 Orthogroups_2024-Update
Sopen03g037680 No alias Membrane transport protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004776 Mem_trans 9 592
No external refs found!