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  5. Seita.4G104200.1

Seita.4G104200.1


Description : regulatory protein *(CYCD) of cell cycle


Gene families : OG_42_0000136 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G104200.1
Cluster HCAA Clusters: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
15078 No alias CYCLIN D3;3 0.03 Orthogroups_2024-Update
412774 No alias CYCLIN D1;1 0.02 Orthogroups_2024-Update
A4A49_22020 No alias cyclin-d3-1 0.03 Orthogroups_2024-Update
Bradi1g24990 No alias Cyclin D6;1 0.03 Orthogroups_2024-Update
Brara.G02950.1 No alias regulatory protein *(CYCD) of cell cycle 0.03 Orthogroups_2024-Update
GRMZM2G047637 No alias CYCLIN D1;1 0.03 Orthogroups_2024-Update
GRMZM2G088980 No alias Cyclin D2;1 0.03 Orthogroups_2024-Update
GRMZM2G476685 No alias CYCLIN D1;1 0.03 Orthogroups_2024-Update
GRMZM2G546369 No alias CYCLIN D4;1 0.02 Orthogroups_2024-Update
Glyma.02G212400 No alias Cyclin D2;1 0.03 Orthogroups_2024-Update
HORVU4Hr1G013700.8 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_17738g0010 No alias (at3g50070 : 241.0) Encode CYCD3;3, a CYCD3 D-type... 0.02 Orthogroups_2024-Update
PSME_00001479-RA No alias (at4g34160 : 239.0) encodes a cyclin D-type protein... 0.04 Orthogroups_2024-Update
Potri.011G040500 No alias Cyclin D6;1 0.03 Orthogroups_2024-Update
Sobic.001G166800.1 No alias regulatory protein *(CYCD) of cell cycle 0.02 Orthogroups_2024-Update
Sobic.005G231400.2 No alias regulatory protein *(CYCD) of cell cycle 0.03 Orthogroups_2024-Update
Sobic.007G160300.1 No alias regulatory protein *(CYCD) of cell cycle 0.02 Orthogroups_2024-Update
Solyc11g010460 No alias cyclinD4_1 0.05 Orthogroups_2024-Update
Sopen01g010480 No alias Cyclin, N-terminal domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR006671 Cyclin_N 94 189
IPR004367 Cyclin_C-dom 193 293
No external refs found!