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  5. Seita.4G122200.1

Seita.4G122200.1


Description : effector protein *(TFL/BFT/CEN) & florigen component *(FT)


Gene families : OG_42_0000178 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000178_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G122200.1
Cluster HCAA Clusters: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
At1g18100 No alias Protein MOTHER of FT and TFL1... 0.03 Orthogroups_2024-Update
At4g20370 No alias Protein of the phosphatidylethanolamine-binding protein... 0.03 Orthogroups_2024-Update
GRMZM2G338454 No alias centroradialis 0.03 Orthogroups_2024-Update
GRMZM2G400167 No alias PEBP (phosphatidylethanolamine-binding protein) family protein 0.03 Orthogroups_2024-Update
GRMZM2G440005 No alias PEBP (phosphatidylethanolamine-binding protein) family protein 0.04 Orthogroups_2024-Update
HORVU5Hr1G078310.15 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os09g33850 No alias osFTL4 FT-Like4 homologous to Flowering Locus T gene;... 0.02 Orthogroups_2024-Update
LOC_Os12g05590 No alias RCN3 Centroradialis-like1 homogous to TFL1 gene;... 0.03 Orthogroups_2024-Update
PSME_00037040-RA No alias (at1g18100 : 250.0) Encodes a member of the FT and TFL1... 0.03 Orthogroups_2024-Update
Potri.009G165100 No alias centroradialis 0.03 Orthogroups_2024-Update
Pp1s243_37V6 No alias Protein MOTHER of FT and TF1 [Arabidopsis thaliana] 0.04 Orthogroups_2024-Update
Sobic.003G026600.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen03g004880 No alias Phosphatidylethanolamine-binding protein 0.03 Orthogroups_2024-Update
Sopen05g032320 No alias Phosphatidylethanolamine-binding protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004357 glutamate-cysteine ligase activity IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0005986 sucrose biosynthetic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
MF GO:0019203 carbohydrate phosphatase activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0050307 sucrose-phosphate phosphatase activity IEP Predicted GO
MF GO:0050308 sugar-phosphatase activity IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR008914 PEBP 51 160
No external refs found!