1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.4G140900.1

Seita.4G140900.1


Description : Unknown function


Gene families : OG_42_0000057 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000057_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G140900.1
Cluster HCAA Clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Brara.B02726.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.04G116000 No alias PIF1 helicase 0.02 Orthogroups_2024-Update
Glyma.10G108221 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.10G108261 No alias PIF1 helicase 0.03 Orthogroups_2024-Update
LOC_Os12g35410 No alias retrotransposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
Seita.2G180800.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.5G173100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen11g011570 No alias PIF1-like helicase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
InterPro domains Description Start Stop
IPR025476 Helitron_helicase-like 362 543
No external refs found!