1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.4G141800.1

Seita.4G141800.1


Description : AHL clade-A transcription factor


Gene families : OG_42_0000350 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G141800.1
Cluster HCAA Clusters: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
A4A49_17278 No alias at-hook motif nuclear-localized protein 20 0.02 Orthogroups_2024-Update
At2g35270 No alias AT-hook motif nuclear-localized protein 21... 0.03 Orthogroups_2024-Update
PSME_00055546-RA No alias (at2g45430 : 196.0) Encodes a nuclear localized AT hook... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005175 PPC_dom 114 221
No external refs found!