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  5. Seita.4G142300.1

Seita.4G142300.1


Description : beta-1,4-galactosyltransferase *(GALS)


Gene families : OG_42_0000862 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000862_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G142300.1
Cluster HCAA Clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
At4g20170 No alias Galactan beta-1,4-galactosyltransferase GALS3... 0.02 Orthogroups_2024-Update
Brara.E01039.1 No alias beta-1,4-galactosyltransferase *(GALS) 0.04 Orthogroups_2024-Update
GRMZM2G164912 No alias Domain of unknown function (DUF23) 0.05 Orthogroups_2024-Update
PSME_00025580-RA No alias (at2g33570 : 538.0) Domain of unknown function (DUF23);... 0.02 Orthogroups_2024-Update
PSME_00037530-RA No alias (at2g33570 : 517.0) Domain of unknown function (DUF23);... 0.02 Orthogroups_2024-Update
PSME_00054805-RA No alias (at2g33570 : 533.0) Domain of unknown function (DUF23);... 0.03 Orthogroups_2024-Update
Potri.003G156600 No alias Domain of unknown function (DUF23) 0.03 Orthogroups_2024-Update
Solyc10g005200 No alias glycosyltransferase family protein (DUF23) (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen04g036580 No alias Glycosyltransferase family 92 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!