1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.4G144900.1

Seita.4G144900.1


Description : mTERF-type transcription factor


Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G144900.1
Cluster HCAA Clusters: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
HORVU6Hr1G005480.40 No alias mTERF-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os11g10000 No alias mTERF family protein, expressed 0.02 Orthogroups_2024-Update
PSME_00056194-RA No alias (at5g64950 : 106.0) Mitochondrial transcription... 0.03 Orthogroups_2024-Update
Potri.001G035300 No alias Mitochondrial transcription termination factor family protein 0.02 Orthogroups_2024-Update
Seita.1G321500.1 No alias mTERF-type transcription factor 0.02 Orthogroups_2024-Update
Sopen04g028720 No alias mTERF 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003690 MTERF 204 306
No external refs found!