1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.4G154000.1

Seita.4G154000.1


Description : cryptochrome photoreceptor *(CRY)


Gene families : OG_42_0001675 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001675_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G154000.1
Cluster HCAA Clusters: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Potri.005G164700 No alias cryptochrome 1 0.03 Orthogroups_2024-Update
Sobic.010G138000.1 No alias cryptochrome photoreceptor *(CRY) 0.03 Orthogroups_2024-Update
Sopen09g033010 No alias FAD binding domain of DNA photolyase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR005101 Cryptochr/Photolyase_FAD-bd 288 483
IPR006050 DNA_photolyase_N 7 161
No external refs found!