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  5. Seita.4G155900.1

Seita.4G155900.1


Description : Unknown function


Gene families : OG_42_0000140 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000140_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G155900.1
Cluster HCAA Clusters: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
At5g54720 No alias Ankyrin repeat family protein... 0.02 Orthogroups_2024-Update
Bradi1g53282 No alias Ankyrin repeat family protein 0.03 Orthogroups_2024-Update
Bradi2g03270 No alias ankyrin repeat family protein 0.02 Orthogroups_2024-Update
Bradi4g20884 No alias Ankyrin repeat family protein 0.05 Orthogroups_2024-Update
Bradi5g03246 No alias Ankyrin repeat family protein 0.02 Orthogroups_2024-Update
Bradi5g03252 No alias Ankyrin repeat family protein 0.03 Orthogroups_2024-Update
Bradi5g27320 No alias Ankyrin repeat family protein 0.06 Orthogroups_2024-Update
Glyma.06G294100 No alias Ankyrin repeat family protein 0.03 Orthogroups_2024-Update
Glyma.06G294200 No alias ankyrin repeat family protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G007250.14 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU3Hr1G115700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os07g31070 No alias expressed protein 0.03 Orthogroups_2024-Update
LOC_Os09g17120 No alias ankyrin repeat domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g08020 No alias ankyrin repeat family protein, putative, expressed 0.02 Orthogroups_2024-Update
Seita.2G339400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.3G349200.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Seita.3G349300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G043400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G325500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G083550.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.005G083601.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.005G083651.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.005G083700.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.005G083733.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.005G083766.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.009G014000.2 No alias Unknown function 0.08 Orthogroups_2024-Update
Sobic.009G146250.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR026961 PGG_dom 495 621
IPR002110 Ankyrin_rpt 395 443
IPR002110 Ankyrin_rpt 95 178
IPR002110 Ankyrin_rpt 320 385
No external refs found!