1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.4G159000.1

Seita.4G159000.1


Description : triterpenoid synthase & EC_5.4 intramolecular transferase


Gene families : OG_42_0000371 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000371_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G159000.1
Cluster HCAA Clusters: Cluster_228

Target Alias Description ECC score Gene Family Method Actions
A4A49_38862 No alias cycloartenol synthase 0.02 Orthogroups_2024-Update
GRMZM2G086590 No alias cycloartenol synthase 1 0.03 Orthogroups_2024-Update
GRMZM2G305148 No alias cycloartenol synthase 1 0.03 Orthogroups_2024-Update
HORVU0Hr1G022520.12 No alias Unknown function 0.07 Orthogroups_2024-Update
Kfl00086_0020 kfl00086_0020_v1.... (at2g07050 : 999.0) Involved in the biosynthesis of... 0.04 Orthogroups_2024-Update
Pp1s33_211V6 No alias cycloartenol synthase 0.02 Orthogroups_2024-Update
Seita.1G091400.1 No alias triterpenoid synthase & EC_5.4 intramolecular transferase 0.02 Orthogroups_2024-Update
Seita.7G138400.1 No alias triterpenoid synthase & EC_5.4 intramolecular... 0.04 Orthogroups_2024-Update
Solyc07g042630 No alias Terpene cyclase/mutase family member (AHRD V3.3 *** V9LYF2_9SOLA) 0.04 Orthogroups_2024-Update
Solyc12g006530 No alias Terpene cyclase/mutase family member (AHRD V3.3 *** M1BMW3_SOLTU) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR032696 SQ_cyclase_C 412 745
IPR032697 SQ_cyclase_N 98 353
No external refs found!