Seita.4G159500.1

Description : Unknown function

Gene families : OG_42_0000888 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.4G159500.1
Cluster	HCAA Clusters: Cluster_275

Target	Alias	Description	ECC score	Gene Family Method
GRMZM2G025793	No alias	Seed maturation protein	0.02	Orthogroups_2024-Update
PSME_00034010-RA	No alias	(p09444\|lea34_goshi : 186.0) Late embryogenesis abundant...	0.02	Orthogroups_2024-Update
Solyc09g082110	No alias	Seed maturation protein/ Late embryogenesis abundant...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity	IEP	Predicted GO
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predicted GO
MF	GO:0005507	copper ion binding	IEP	Predicted GO
BP	GO:0006694	steroid biosynthetic process	IEP	Predicted GO
BP	GO:0008202	steroid metabolic process	IEP	Predicted GO
MF	GO:0016229	steroid dehydrogenase activity	IEP	Predicted GO
BP	GO:0017004	cytochrome complex assembly	IEP	Predicted GO
BP	GO:0019321	pentose metabolic process	IEP	Predicted GO
BP	GO:0019566	arabinose metabolic process	IEP	Predicted GO
MF	GO:0030246	carbohydrate binding	IEP	Predicted GO
MF	GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Predicted GO
BP	GO:0046373	L-arabinose metabolic process	IEP	Predicted GO
MF	GO:0046556	alpha-L-arabinofuranosidase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR007011	SMP	159	216
IPR007011	SMP	224	282
IPR007011	SMP	40	100

External Links

No external refs found!