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  5. Seita.4G164800.1

Seita.4G164800.1


Description : Unknown function


Gene families : OG_42_0000057 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000057_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G164800.1
Cluster HCAA Clusters: Cluster_295

Target Alias Description ECC score Gene Family Method Actions
Bradi4g18358 No alias PIF1 helicase 0.02 Orthogroups_2024-Update
GRMZM2G450935 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.10G108221 No alias Function unknown 0.03 Orthogroups_2024-Update
LOC_Os11g28650 No alias retrotransposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
Seita.1G148500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.3G310800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.4G159100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.6G126900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.7G026900.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEA 16Dec
MF GO:0003678 DNA helicase activity IEA 16Dec
BP GO:0006281 DNA repair IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR010285 DNA_helicase_pif1-like 630 954
IPR025476 Helitron_helicase-like 4 185
No external refs found!