Seita.4G168400.1

Description : cyclic nucleotide-gated cation channel *(CNGC)

Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.4G168400.1
Cluster	HCAA Clusters: Cluster_179

Target	Alias	Description	ECC score	Gene Family Method
84488	No alias	cyclic nucleotide-gated cation channel 4	0.02	Orthogroups_2024-Update
Bradi1g46260	No alias	cyclic nucleotide-binding transporter 1	0.02	Orthogroups_2024-Update
Bradi3g57510	No alias	cyclic nucleotide-binding transporter 1	0.05	Orthogroups_2024-Update
Bradi5g23700	No alias	cyclic nucleotide gated channel 5	0.03	Orthogroups_2024-Update
Brara.K00815.1	No alias	cyclic nucleotide-gated cation channel *(CNGC)	0.02	Orthogroups_2024-Update
Glyma.06G271200	No alias	cyclic nucleotide-gated cation channel 4	0.03	Orthogroups_2024-Update
Glyma.16G025400	No alias	cyclic nucleotide-gated channel 13	0.01	Orthogroups_2024-Update
HORVU5Hr1G065950.1	No alias	cyclic nucleotide-gated cation channel *(CNGC)	0.02	Orthogroups_2024-Update
HORVU6Hr1G083790.3	No alias	cyclic nucleotide-gated cation channel *(CNGC)	0.05	Orthogroups_2024-Update
HORVU7Hr1G079400.3	No alias	cyclic nucleotide-gated cation channel *(CNGC)	0.03	Orthogroups_2024-Update
Kfl00044_0210	kfl00044_0210_v1.1	(at2g28260 : 392.0) member of Cyclic nucleotide gated...	0.02	Orthogroups_2024-Update
Potri.001G407800	No alias	cyclic nucleotide-gated cation channel 4	0.03	Orthogroups_2024-Update
Potri.012G002200	No alias	cyclic nucleotide gated channel 1	0.04	Orthogroups_2024-Update
Potri.015G033900	No alias	cyclic nucleotide-binding transporter 1	0.03	Orthogroups_2024-Update
Seita.1G014200.1	No alias	cyclic nucleotide-gated cation channel *(CNGC)	0.03	Orthogroups_2024-Update
Sobic.004G113400.1	No alias	cyclic nucleotide-gated cation channel *(CNGC)	0.03	Orthogroups_2024-Update
Sopen03g033170	No alias	Ion transport protein	0.02	Orthogroups_2024-Update
Sopen07g001700	No alias	Ion transport protein	0.02	Orthogroups_2024-Update
Sopen12g004880	No alias	Ion transport protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	IEA	16Dec
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	16Dec
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	16Dec

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Type	GO Term	Name	Evidence	Source
MF	GO:0000030	mannosyltransferase activity	IEP	Predicted GO
MF	GO:0000166	nucleotide binding	IEP	Predicted GO
MF	GO:0003746	translation elongation factor activity	IEP	Predicted GO
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predicted GO
MF	GO:0004619	phosphoglycerate mutase activity	IEP	Predicted GO
MF	GO:0005488	binding	IEP	Predicted GO
MF	GO:0005515	protein binding	IEP	Predicted GO
CC	GO:0005737	cytoplasm	IEP	Predicted GO
CC	GO:0005783	endoplasmic reticulum	IEP	Predicted GO
BP	GO:0006414	translational elongation	IEP	Predicted GO
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	Predicted GO
MF	GO:0008483	transaminase activity	IEP	Predicted GO
MF	GO:0016636	oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	IEP	Predicted GO
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Predicted GO
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predicted GO
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Predicted GO
MF	GO:0017076	purine nucleotide binding	IEP	Predicted GO
MF	GO:0019001	guanyl nucleotide binding	IEP	Predicted GO
MF	GO:0031683	G-protein beta/gamma-subunit complex binding	IEP	Predicted GO
MF	GO:0033925	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	IEP	Predicted GO
MF	GO:0033926	glycopeptide alpha-N-acetylgalactosaminidase activity	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
MF	GO:0036094	small molecule binding	IEP	Predicted GO
MF	GO:0046537	2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity	IEP	Predicted GO
MF	GO:0051743	red chlorophyll catabolite reductase activity	IEP	Predicted GO
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Predicted GO
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Predicted GO
MF	GO:0140103	catalytic activity, acting on a glycoprotein	IEP	Predicted GO
MF	GO:1901265	nucleoside phosphate binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR005821	Ion_trans_dom	50	365

External Links

No external refs found!

Seita.4G168400.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation