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  5. Seita.4G169700.1

Seita.4G169700.1


Description : EC_3.2 glycosylase


Gene families : OG_42_0000462 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000462_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G169700.1
Cluster HCAA Clusters: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
A4A49_10730 No alias glucan endo-1,3-beta-glucosidase 11 0.03 Orthogroups_2024-Update
Brara.A03104.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Brara.C02423.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.I02681.1 No alias regulatory beta-1,3 glucanase *(BG_ppap) & EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
HORVU4Hr1G063240.5 No alias EC_3.2 glycosylase 0.05 Orthogroups_2024-Update
LOC_Os04g33640 No alias glycosyl hydrolases family 17, putative, expressed 0.02 Orthogroups_2024-Update
Sobic.004G165600.1 No alias EC_3.2 glycosylase 0.05 Orthogroups_2024-Update
Solyc02g070450 No alias Glucan endo-1,3-beta-glucosidase, putative (AHRD V3.3... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 35 353
No external refs found!