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  5. Seita.4G175600.1

Seita.4G175600.1


Description : transcription factor *(CLAUSA)


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G175600.1
Cluster HCAA Clusters: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
A4A49_09886 No alias putative transcription factor kan2 0.02 Orthogroups_2024-Update
A4A49_39609 No alias myb-related protein 2 0.04 Orthogroups_2024-Update
Bradi3g36260 No alias Homeodomain-like superfamily protein 0.07 Orthogroups_2024-Update
Bradi3g52500 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Bradi5g18590 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Brara.E02831.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Brara.H00915.1 No alias KANADI-type transcription factor 0.02 Orthogroups_2024-Update
Brara.J01739.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G009060 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G374986 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G158900 No alias myb-like HTH transcriptional regulator family protein 0.07 Orthogroups_2024-Update
Glyma.12G089100 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G228900 No alias myb-like HTH transcriptional regulator family protein 0.08 Orthogroups_2024-Update
Glyma.16G152200 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G108600 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G095530.2 No alias transcription factor *(CLAUSA) 0.04 Orthogroups_2024-Update
HORVU6Hr1G031470.1 No alias regulatory protein *(FE) of florigen biosynthesis & GARP... 0.06 Orthogroups_2024-Update
MA_1432g0010 No alias (at3g13040 : 86.3) myb-like HTH transcriptional... 0.02 Orthogroups_2024-Update
MA_84935g0010 No alias (at1g14600 : 113.0) Homeodomain-like superfamily... 0.05 Orthogroups_2024-Update
MA_8865g0010 No alias (at1g32240 : 147.0) Encodes a member of the KANADI... 0.02 Orthogroups_2024-Update
Mp3g04970.1 No alias G2-like GARP transcription factor 0.01 Orthogroups_2024-Update
PSME_00002495-RA No alias (at1g32240 : 135.0) Encodes a member of the KANADI... 0.02 Orthogroups_2024-Update
PSME_00022449-RA No alias (at2g40260 : 137.0) Homeodomain-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00043566-RA No alias (at3g04030 : 229.0) Homeodomain-like superfamily... 0.02 Orthogroups_2024-Update
Potri.008G087600 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Seita.1G286400.1 No alias GARP subgroup PHL transcription factor 0.06 Orthogroups_2024-Update
Sobic.010G224200.1 No alias transcription factor *(CLAUSA) 0.04 Orthogroups_2024-Update
Solyc09g005030 No alias Homeodomain-like superfamily protein (AHRD V3.3 *-* AT2G40260.1) 0.03 Orthogroups_2024-Update
Sopen10g029340 No alias MYB-CC type transfactor, LHEQLE motif 0.04 Orthogroups_2024-Update
Sopen10g035030 No alias MYB-CC type transfactor, LHEQLE motif 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 117 167
No external refs found!