Description : component *(eS24) of small ribosomal-subunit (SSU) proteome
Gene families : OG_42_0001483 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001483_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Setaria italica: Seita.4G181700.1 | |
Cluster | HCAA Clusters: Cluster_37 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
271584 | No alias | Ribosomal protein S24e family protein | 0.1 | Orthogroups_2024-Update | |
A4A49_64768 | No alias | 40s ribosomal protein s24-1 | 0.17 | Orthogroups_2024-Update | |
At3g04920 | No alias | 40S ribosomal protein S24-1... | 0.03 | Orthogroups_2024-Update | |
Bradi3g08680 | No alias | Ribosomal protein S24e family protein | 0.11 | Orthogroups_2024-Update | |
Brara.A03743.1 | No alias | component *(eS24) of small ribosomal-subunit (SSU) proteome | 0.09 | Orthogroups_2024-Update | |
Brara.B03525.1 | No alias | component *(eS24) of small ribosomal-subunit (SSU) proteome | 0.15 | Orthogroups_2024-Update | |
Brara.E03413.1 | No alias | component *(eS24) of small ribosomal-subunit (SSU) proteome | 0.16 | Orthogroups_2024-Update | |
Brara.F02892.1 | No alias | component *(eS24) of small ribosomal-subunit (SSU) proteome | 0.16 | Orthogroups_2024-Update | |
Brara.I00438.1 | No alias | component *(eS24) of small ribosomal-subunit (SSU) proteome | 0.2 | Orthogroups_2024-Update | |
Cre10.g456200 | No alias | Ribosomal protein S24e family protein | 0.27 | Orthogroups_2024-Update | |
GRMZM2G151252 | No alias | Ribosomal protein S24e family protein | 0.09 | Orthogroups_2024-Update | |
GRMZM2G171426 | No alias | Ribosomal protein S24e family protein | 0.11 | Orthogroups_2024-Update | |
Glyma.03G245300 | No alias | Ribosomal protein S24e family protein | 0.07 | Orthogroups_2024-Update | |
Glyma.10G160300 | No alias | Ribosomal protein S24e family protein | 0.16 | Orthogroups_2024-Update | |
Glyma.19G242700 | No alias | Ribosomal protein S24e family protein | 0.09 | Orthogroups_2024-Update | |
Glyma.20G228100 | No alias | Ribosomal protein S24e family protein | 0.14 | Orthogroups_2024-Update | |
HORVU6Hr1G044840.1 | No alias | component *(eS24) of small ribosomal-subunit (SSU) proteome | 0.08 | Orthogroups_2024-Update | |
HORVU7Hr1G088580.1 | No alias | component *(eS24) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
Kfl00638_0040 | kfl00638_0040_v1.1 | (at3g04920 : 195.0) Ribosomal protein S24e family... | 0.05 | Orthogroups_2024-Update | |
MA_119841g0010 | No alias | (at3g04920 : 158.0) Ribosomal protein S24e family... | 0.09 | Orthogroups_2024-Update | |
MA_119894g0010 | No alias | (at3g04920 : 188.0) Ribosomal protein S24e family... | 0.1 | Orthogroups_2024-Update | |
PSME_00005358-RA | No alias | (at3g04920 : 189.0) Ribosomal protein S24e family... | 0.14 | Orthogroups_2024-Update | |
PSME_00019619-RA | No alias | (at3g04920 : 187.0) Ribosomal protein S24e family... | 0.08 | Orthogroups_2024-Update | |
Potri.010G087800 | No alias | Ribosomal protein S24e family protein | 0.09 | Orthogroups_2024-Update | |
Potri.013G036100 | No alias | Ribosomal protein S24e family protein | 0.1 | Orthogroups_2024-Update | |
Pp1s13_236V6 | No alias | 40s ribosomal protein | 0.03 | Orthogroups_2024-Update | |
Pp1s204_49V6 | No alias | 40s ribosomal protein | 0.23 | Orthogroups_2024-Update | |
Pp1s37_112V6 | No alias | 40s ribosomal protein | 0.21 | Orthogroups_2024-Update | |
Pp1s450_3V6 | No alias | 40s ribosomal protein | 0.04 | Orthogroups_2024-Update | |
Pp1s450_9V6 | No alias | 40s ribosomal protein | 0.21 | Orthogroups_2024-Update | |
Seita.1G028300.1 | No alias | component *(eS24) of small ribosomal-subunit (SSU) proteome | 0.07 | Orthogroups_2024-Update | |
Sobic.003G280700.1 | No alias | component *(eS24) of small ribosomal-subunit (SSU) proteome | 0.23 | Orthogroups_2024-Update | |
Sobic.004G099500.1 | No alias | component *(eS24) of small ribosomal-subunit (SSU) proteome | 0.22 | Orthogroups_2024-Update | |
Sobic.010G166100.1 | No alias | component *(eS24) of small ribosomal-subunit (SSU) proteome | 0.1 | Orthogroups_2024-Update | |
Solyc01g097870 | No alias | 40S ribosomal protein S24 (AHRD V3.3 *** K4B0H4_SOLLC) | 0.1 | Orthogroups_2024-Update | |
Solyc06g084230 | No alias | 40S ribosomal protein S24 (AHRD V3.3 *** K4CUG0_SOLLC) | 0.14 | Orthogroups_2024-Update | |
Solyc09g065330 | No alias | 40S ribosomal protein S24 (AHRD V3.3 *** K4CAS8_SOLLC) | 0.17 | Orthogroups_2024-Update | |
Sopen01g041470 | No alias | Ribosomal protein S24e | 0.09 | Orthogroups_2024-Update | |
Sopen09g027090 | No alias | Ribosomal protein S24e | 0.11 | Orthogroups_2024-Update | |
evm.model.contig_2036.17 | No alias | (at3g04920 : 137.0) Ribosomal protein S24e family... | 0.26 | Orthogroups_2024-Update | |
evm.model.tig00000361.64 | No alias | (at3g04920 : 129.0) Ribosomal protein S24e family... | 0.25 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | 16Dec |
CC | GO:0005840 | ribosome | IEA | 16Dec |
BP | GO:0006412 | translation | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
MF | GO:0003854 | 3-beta-hydroxy-delta5-steroid dehydrogenase activity | IEP | Predicted GO |
CC | GO:0005742 | mitochondrial outer membrane translocase complex | IEP | Predicted GO |
CC | GO:0005743 | mitochondrial inner membrane | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006694 | steroid biosynthetic process | IEP | Predicted GO |
BP | GO:0006839 | mitochondrial transport | IEP | Predicted GO |
BP | GO:0006848 | pyruvate transport | IEP | Predicted GO |
BP | GO:0006850 | mitochondrial pyruvate transmembrane transport | IEP | Predicted GO |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
BP | GO:0008202 | steroid metabolic process | IEP | Predicted GO |
BP | GO:0015711 | organic anion transport | IEP | Predicted GO |
BP | GO:0015718 | monocarboxylic acid transport | IEP | Predicted GO |
BP | GO:0015849 | organic acid transport | IEP | Predicted GO |
CC | GO:0015934 | large ribosomal subunit | IEP | Predicted GO |
MF | GO:0016229 | steroid dehydrogenase activity | IEP | Predicted GO |
BP | GO:0017038 | protein import | IEP | Predicted GO |
CC | GO:0019866 | organelle inner membrane | IEP | Predicted GO |
BP | GO:0030150 | protein import into mitochondrial matrix | IEP | Predicted GO |
CC | GO:0031966 | mitochondrial membrane | IEP | Predicted GO |
BP | GO:0033365 | protein localization to organelle | IEP | Predicted GO |
MF | GO:0033764 | steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
BP | GO:0034613 | cellular protein localization | IEP | Predicted GO |
CC | GO:0044391 | ribosomal subunit | IEP | Predicted GO |
CC | GO:0044422 | organelle part | IEP | Predicted GO |
CC | GO:0044429 | mitochondrial part | IEP | Predicted GO |
CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
CC | GO:0044455 | mitochondrial membrane part | IEP | Predicted GO |
BP | GO:0044743 | protein transmembrane import into intracellular organelle | IEP | Predicted GO |
BP | GO:0046942 | carboxylic acid transport | IEP | Predicted GO |
BP | GO:0065002 | intracellular protein transmembrane transport | IEP | Predicted GO |
BP | GO:0070585 | protein localization to mitochondrion | IEP | Predicted GO |
BP | GO:0070727 | cellular macromolecule localization | IEP | Predicted GO |
BP | GO:0071702 | organic substance transport | IEP | Predicted GO |
BP | GO:0071806 | protein transmembrane transport | IEP | Predicted GO |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | Predicted GO |
BP | GO:0072655 | establishment of protein localization to mitochondrion | IEP | Predicted GO |
BP | GO:0098656 | anion transmembrane transport | IEP | Predicted GO |
CC | GO:0098798 | mitochondrial protein complex | IEP | Predicted GO |
CC | GO:0098799 | outer mitochondrial membrane protein complex | IEP | Predicted GO |
BP | GO:1901475 | pyruvate transmembrane transport | IEP | Predicted GO |
BP | GO:1903825 | organic acid transmembrane transport | IEP | Predicted GO |
BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | Predicted GO |
BP | GO:1990542 | mitochondrial transmembrane transport | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001976 | Ribosomal_S24e | 29 | 107 |
No external refs found! |